Scilligence ELN 2.0.0 Release 

Saturday, March 30, 2013 9:37:00 AM

Scilligence ELN is a completely web-based electronic lab notebook system for Chemistry and Biology.

Scilligence ELN 2.0.0 includes following changes and improvements:

  1. Be able to upload multiple files
  2. Be able to set default sorting by column
  3. Move all settings to web.config
  4. Add molar concentration field
  5. Add density look-up table, and users are able to customize it
  6. Density unit now accepts mg/ml, ug/ml
  7. Be able to redirect to main domain name
  8. Export experiments into Word documents
  9. Improved PDF exporter
  10. Simplified installation1
  11. Customizable PDF/Word exporting
  12. Be able to link file to File Store
  13. Use vector images in exported PDF
  14. Be able to customize it as biology centrialized ELN
  15. Use license code in database side
  16. Move JSDraw to modern 2.0 skin
  17. bugfix: structure-to-name returns wrong structure for most time
  18. bugfix: ChemDraw structure not editable any more
  19. bugfix: cannot preview EMF/WMF

Please contact us from our website http://www.scilligence.com/web/contact.aspx to schedule a demo, begin an evaluation, or request further information.

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RegMol 2.0.0 Release 

Saturday, March 30, 2013 9:15:00 AM

RegMol is compound registration and assay database system, enabling scientists to register and track small-molecule, biologics and biological conjugates, storing and retreiving biological assay data.

RegMol 2.0.0 includes following improvements and changes:

  1. Be able to register No Structure/No Sequence
  2. AssayViewer and ProjectPortal show average assay numbers for multiple results
  3. Register Protein, and Antibody
  4. New biological numbering scheme: SCI-######-00-##
  5. Separate chemical and biological register form
  6. Be able to hide fields
  7. Use license code in database side
  8. Move JSDraw to modern 2.0 skin
  9. Customize JSDraw in web.config

Please contact us from our website http://www.scilligence.com/web/contact.aspx to schedule a demo, begin an evaluation, or request further information.

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TouchMol 1.1.1 release 

Wednesday, March 20, 2013 7:07:00 AM

TouchMol for Office is delivered as a set of add-ins to the Microsoft Office application programs.  Enabling the input and editing of molecular structures within Word, Excel, PowerPoint, and OneNote.

TouchMol 1.1.1 includes the following new features:

  1. Support Office 2013
  2. Improved clipboard support on ChemDraw and ISIS/Draw objects
  3. Improve JSDraw editor loading speed
  4. New VBA APIs: Molecule object, MolProperty
  5. New VBA API to do custom Compound Profile
  6. bugfix: Structure sizing issue in Word
  7. Help files are changed into XPS format, so it won't need PDF Reader

To download our TouchMol, follow the links below:

TouchMol for Office 2010 and 2013 (for both x86 and x64):
http://www.scilligence.com/web/download.aspx?prod=TouchMol4Office2010

TouchMol for Office 2007:
http://www.scilligence.com/web/download.aspx?prod=TouchMol4Office2007

TouchMol Desktop:
http://www.scilligence.com/web/download.aspx?prod=TouchMolDesktop

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TouchMol365 as Featured Office App 

Monday, March 04, 2013 10:33:00 PM

Cheminformatics DevSuite 2.5.0 Release, Including JSDraw, MolEngine and MolSql 

Friday, March 01, 2013 9:57:00 AM

Scilligence Cheminformatics Development Suite (DevSuite, http://devsuite.scilligence.com) is a complete toolkits for developers to build web applications and .NET applications.  Dev Suite contains following key modules:

  1. JSDraw - 100% Javascript Chemical/Biological Structure Editor
  2. JSDraw.WebServices - JSDraw server side web services to exend JSDraw capabilities
  3. MolEngine - .NET Cheminformatics Toolkit
  4. MolEngine.Plugins - Third-party modules to extend MolEngine capabilities
  5. MolSql - Chemistry Cartridge for Microsoft SQL Server

DevSuite release 2.5.0 includes:

  1. JSDraw 2.5.0
    1. [Pro] Add FormulationTable and StoichiometryGrid
    2. Density unit now accepts mg/ml, ug/ml
    3. Add column type molar
    4. [Pro] Add javascript controls: AutoComplete, DatePicker, Dropdown, EditableTable, Form, Progress, table, Tree
    5. chane namespace from JSDraw2 to scilligence.JSDraw2
    6. Singleton and Enumerated Combi form are changed
    7. bugfix: broken on dojo 1.5
    8. Add Gene bio type
    9. Be able to set default XDraw editor
    10. bugfix: fail to create JSDraw editor if the placeholder is in a hidden tag
  2. JSDraw.WebServices 2.5.0
    1. Upgraded MolEngine to 1.4.0
  3. MolEngine 1.4.0
    1. Add Gene Atom bio type
    2. Sequense accepts comments lines, such as FASTA
    3. Add DNA Codon table
    4. Split N2S and S2N plugin configuration, so it is able to use one software for N2S and use another one for S2N
    5. Deal with Oracle type problem using Microsoft Oracle provider
    6. Add setting: molengine.monocolor
    7. Be able to customize MolEngine drawing
    8. Be able to customize JSDraw defaultoptions in web.config
  4. MolEngine Plugins
    1. No changes for this release
  5. MolSql 1.3.13
    1. No changes for this release

To download DevSuite or individual modules:

  1. JSDraw: http://www.scilligence.com/web/download.aspx?prod=JSDraw
  2. JSDraw.WebServices: http://www.scilligence.com/web/download.aspx?prod=JSDraw.WebServices
  3. MolEngine: http://www.scilligence.com/web/download.aspx?prod=MolEngine
  4. MolEngine.Plugins: http://www.scilligence.com/web/download.aspx?prod=MolEngine.Plugins
  5. MolSql: http://www.scilligence.com/web/download.aspx?prod=MolSql

Please contact us from our website http://www.scilligence.com/web/contact.aspx to schedule a demo, begin an evaluation, or request further information.

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JSDraw.XDraw technology support Accelrys JDraw now 

Wednesday, February 13, 2013 10:07:00 AM

Currently XDraw supports only IE browser.

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Chrawler 2.1.0 Release 

Friday, February 01, 2013 9:00:00 AM

Chrawler™ is a federated chemical structure search solution for enterprises, which enables users to do one-stop search cross all data sources, including files on network drives, SharePoint database, Emails, ELN, and other databases (Oracle, SQL Server etc.)

Chrawler™ SE 2.1.0 release includes following improvements and changes:

  1. Improve OSR crawling
  2. Be able to export all structures for one file
  3. Support extra document metadata
  4. Improved sytem name recognization
  5. Be able not to remove deleted documents
  6. Full-text search metadata
  7. Be able to directly search a path
  8. Be able to star queries, and add notes to queries
  9. bugfix: many chemical names in multi-column pdf files not recognized
  10. bugfix: full-text search failed if query contains brackets
  11. bugfix: fulltext doesn't bring sources without structures
  12. bugfix: quote cause text search problem
  13. DB change: update view v_molurls and v_rxnurls

Please contact us from our website http://www.scilligence.com/web/contact.aspx to schedule a demo, begin an evaluation, or request further information.

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Chem4SharePoint 2.1.0 Release 

Friday, February 01, 2013 9:00:00 AM

Chem4SharePoint™ enables chemistry capabilities within SharePoint.  With Chem4SharePoint, scientists are able to draw, display, and search chemical structures in SharePoint.  Chem4SharePoint also provides an out-of-the-box solution for a one-stop-shopping chemical structure search capability for enterprises.

Chem4SharePoint 2.1.0 release includes following improvements and changes:

  1. All changes in Chrawler 2.1.0
  2. Be able to filter structures on SharePoint Lists
  3. Be able to use Accelrys JDraw as the structure editor
  4. bugfix: My Queries link leads to a broken page
  5. bugfix: Cannot delte/rename data sources
  6. bugfix: installer cannot put license on E drive
  7. bugfix: special chars in url strings

Please contact us from our website http://www.scilligence.com/web/contact.aspx to schedule a demo, begin an evaluation, or request further information.

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RegMol 1.3.1 Release 

Friday, February 01, 2013 7:38:00 AM

RegMol is compound registration and assay database system, enabling scientists to register and track small-molecule, biologics and biological conjugates, storing and retreiving biological assay data.

RegMol 1.3.1 includes following improvements and changes:

  1. Barcode Printer always shows version 1.0.0.0
  2. bugfix: browsing problem on IE7
  3. bugfix: new containers are not searchable with full-text
  4. bugfix: Notes are displayed

Please contact us from our website http://www.scilligence.com/web/contact.aspx to schedule a demo, begin an evaluation, or request further information.

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Scilligence ELN 1.3.1 Release 

Friday, February 01, 2013 7:34:00 AM

Scilligence ELN is a completely web-based electronic lab notebook system for Chemistry and Biology.

Scilligence ELN 1.3.1 includes following changes and improvements:

  1. Move Server Settings to web.config
  2. Remove Con% column from Single-Step reaction
  3. bugfix: JsRect error
  4. bugfix: URL links in notification doesn't work
  5. bugfix: Text editor doesn't work on iPad
  6. be able to set session timeout

Please contact us from our website http://www.scilligence.com/web/contact.aspx to schedule a demo, begin an evaluation, or request further information.

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Cheminformatics DevSuite 2.1.6 Release, Including JSDraw, MolEngine and MolSql  

Friday, February 01, 2013 6:50:00 AM

Scilligence Cheminformatics Development Suite (DevSuite, http://devsuite.scilligence.com) is a complete toolkits for developers to build web applications and .NET applications.  Dev Suite contains following key modules:

  1. JSDraw - 100% Javascript Chemical/Biological Structure Editor
  2. JSDraw.WebServices - JSDraw server side web services to exend JSDraw capabilities
  3. MolEngine - .NET Cheminformatics Toolkit
  4. MolEngine.Plugins - Third-party modules to extend MolEngine capabilities
  5. MolSql - Chemistry Cartridge for Microsoft SQL Server

DevSuite release 2.1.6 includes:

  1. JSDraw 2.1.6
    1. JSDraw Stoichiometry Grid is available separately
    2. XDraw tab now support JSDraw (Javascript), ChemDraw (ActiveX) and Accelrys JSDraw (Applet)
    3. bugfix: S has wrong H count on c1cscc1
    4. Improve API documentation at: http://www.scilligence.com/sdk/JSDraw/
  2. JSDraw.WebServices 2.1.6
    1. Upgraded MolEngine to 1.3.13
  3. MolEngine 1.3.13
    1. Be able to set internet proxy for MolEngine
    2. bugfix: cannot unwrap some SKC objects
  4. MolEngine Plugins
    1. No changes for this release
  5. MolSql 1.3.13
    1. Support SQL Server 2012 (earlier versions support only SQL Server 2005 and 2008)

To download DevSuite or individual modules:

  1. JSDraw: http://www.scilligence.com/web/download.aspx?prod=JSDraw
  2. JSDraw.WebServices: http://www.scilligence.com/web/download.aspx?prod=JSDraw.WebServices
  3. MolEngine: http://www.scilligence.com/web/download.aspx?prod=MolEngine
  4. MolEngine.Plugins: http://www.scilligence.com/web/download.aspx?prod=MolEngine.Plugins
  5. MolSql: http://www.scilligence.com/web/download.aspx?prod=MolSql

Please contact us from our website http://www.scilligence.com/web/contact.aspx to schedule a demo, begin an evaluation, or request further information.

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Chemistry Stoichiometry Grid and Formulation Table 

Wednesday, January 30, 2013 9:17:00 PM

Build and JSDraw and JSDraw.Table, there are two javascript controls are avaible separated from the standard JSDraw package:

JSDraw Stoichiometry Grid:

JSDraw Formulation Table:

JSDraw Stoichiometry Grid is avaible in JSDraw 2.1.6 release, and JSDraw Formulation Table will be available in JSDraw 2.1.7

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Chem4SharePoint 3.0 Preview - Supporting SharePoint 2013 

Tuesday, January 29, 2013 4:28:00 PM

A Prevew Picture of Chem4SharePoint 3.0, which supports SharePoint 2013:

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TouchMol 1.1 Final Release 

Monday, January 07, 2013 9:42:00 AM

Scilligence is very pleased to announce the release of TouchMol for MS Office version 1.1.   TouchMol for Office is delivered as a set of add-ins to the Microsoft Office application programs.  Enabling the input and editing of molecular structures within Word, Excel, PowerPoint, and OneNote.

TouchMol 1.1 includes the following new features:

TouchMol.Table – A new component to TouchMol for Office introduced in this version that can:

  1. Open/Save SDF, CSV, MolEngine files
  2. Display Data in Table and Grid mode
  3. Color coding of cells for heat maps
  4. Fast structure search
  5. Structure duplicate checking
  6. Query the PubChem database for Patent, Assay, and Literature data
  7. Load data or calculates properties from databases and web services
  8. Configure GUI to query in-house databases, including SQL Server, Oracle and MySql
  9. Calculate properties locally with MolEngine
  10. Flag and categorize  compounds

TouchMol Application

  1. Generate IUPAC names from variety of structure-to-name module
  2. Look up IUPAC names from PubChem and ChemSpider databases

TouchMol for Excel

  1. Open/export CSV and MolEngine files
  2. Load and filter large compound library via TouchMol.Table
  3. Query PubChem database for Patent, Assay and Literature data
  4. Load data from databases or web services
  5. Configure GUI to query in-house databases, including SQL Server, Oracle and MySql
  6. Calculate properties locally with MolEngine, or remotely calling web services

TouchMol for Word

  1. Generate IUPAC names using structure-to-name module
  2. Look up IUPAC names from PubChem and ChemSpider databases

To download our Preview of TouchMol 1.1, follow the links below:

TouchMol for Office 2010 (for both x86 and x64):
http://www.scilligence.com/web/download.aspx?prod=TouchMol4Office2010

TouchMol for Office 2007:
http://www.scilligence.com/web/download.aspx?prod=TouchMol4Office2007

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DevSuite 2.1.5 Release, Including JSDraw, MolEngine and MolSql 

Wednesday, January 02, 2013 8:36:00 PM

Scilligence Cheminformatics Development Suite (DevSuite, http://devsuite.scilligence.com) is a complete toolkits for developers to build web applications and .NET applications.  Dev Suite contains following key modules:

  1. JSDraw - 100% Javascript Chemical/Biological Structure Editor
  2. JSDraw.WebServices - JSDraw server side web services to exend JSDraw capabilities
  3. MolEngine - .NET Cheminformatics Toolkit
  4. MolEngine.Plugins - Third-party modules to extend MolEngine capabilities
  5. MolSql - Chemistry Cartridge for Microsoft SQL Server

DevSuite release 2.1.5 includes:

  1. JSDraw 2.1.4
    1. No changes for this release
  2. JSDraw.WebServices 2.1.5
    1. Upgraded MolEngine to 1.3.12
  3. MolEngine 1.3.12
    1. bugfix: cannot read chinese/japanese out of CDX files
    2. bugfix: crash when drawing extremely small structures
    3. MolEngine database upgraded to version 8 to store database-level properties
    4. Name2structure is able to handle some typos
    5. bugfix: failed to extract some names
    6. Be able to support custom database provider
    7. Add Gene dictionary
  4. MolEngine Plugins
    1. No changes for this release
  5. MolSql 1.3.11
    1. No changes for this release

To download DevSuite or individual modules:

  1. JSDraw: http://www.scilligence.com/web/download.aspx?prod=JSDraw
  2. JSDraw.WebServices: http://www.scilligence.com/web/download.aspx?prod=JSDraw.WebServices
  3. MolEngine: http://www.scilligence.com/web/download.aspx?prod=MolEngine
  4. MolEngine.Plugins: http://www.scilligence.com/web/download.aspx?prod=MolEngine.Plugins
  5. MolSql: http://www.scilligence.com/web/download.aspx?prod=MolSql

Please contact us from our website http://www.scilligence.com/web/contact.aspx to schedule a demo, begin an evaluation, or request further information.

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TouchMol 1.1 Preview Release 

Wednesday, December 12, 2012 9:50:00 AM

Scilligence is very pleased to announce the Preview release of TouchMol for MS Office version 1.1.   TouchMol for Office is delivered to you as a set of add-ins to the Microsoft Office application programs.  Enabling the input and editing of molecular structures within Word, Excel, PowerPoint, and OneNote.

TouchMol 1.1 includes following new features:

1. TouchMol.Table – A new program introduced in this version

  • - Open/Save SDF, CSV, MolEngine files
  • - View structures in Table and Grid mode
  • - Color coding/heat maps
  • - Fast structure search, including substructure, full-structure and similarity search
  • - Structure duplicate check
  • - Query PubChem database for Patent, Assay and Literature data
  • - Load data from databases or web services
  • - Configure GUI to query in-house databases, including SQL Server, Oracle and MySql
  • - Calculate properties locally with MolEngine, or remotely calling web services
  • - Flag and categorize  compounds

2. TouchMol Application

  • - Generate IUPAC names from variety of structure-to-name module
  • - Look up IUPAC names from PubChem and ChemSpider databases

3. TouchMol for Excel

  • - Open/export CSV and MolEngine files
  • - Load and filter large compound library via TouchMol.Table
  • - Query PubChem database for Patent, Assay and Literature data
  • - Load data from databases or web services
  • - Configure GUI to query in-house databases, including SQL Server, Oracle and MySql
  • - Calculate properties locally with MolEngine, or remotely calling web services

4. TouchMol for Word

  • - Generate IUPAC names using structure-to-name module
  • - Look up IUPAC names from PubChem and ChemSpider databases

To download TouchMol 1.1:

TouchMol for Office 2010:
http://www.scilligence.com/web/download.aspx?prod=TouchMol%20for%20Office%202010%20V1.1%20(Preview)

TouchMol for Office 2007:
http://www.scilligence.com/web/download.aspx?prod=TouchMol%20for%20Office%202007%20V1.1%20(Preview)

TouchMol Desktop:
http://www.scilligence.com/web/download.aspx?prod=TouchMol%20Desktop%20V1.1%20(Preview)

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Directly Load PubChem Patent, Assay and Literature Data into Excel and TouchMol.Table 

Tuesday, December 11, 2012 9:06:00 AM

TouchMol 1.1 added one very useful features for users to directly load Patent, Assay and Literature data from PubChem database:

TouchMol 1.1 is now in Preview release.  You can download it and give it a try.

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Scilligence Logo on Compound Heat Map 

Thursday, December 06, 2012 8:04:00 PM

The background of the following image is generated by TouchMol.Table:

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DevSuite 2.1.4 Release, Including JSDraw, MolEngine and MolSql 

Sunday, December 02, 2012 7:25:00 AM

Scilligence Cheminformatics Development Suite (DevSuite, http://devsuite.scilligence.com) is a complete toolkits for developers to build web applications and .NET applications.  Dev Suite contains following key modules:

  1. JSDraw - 100% Javascript Chemical/Biological Structure Editor
  2. JSDraw.WebServices - JSDraw server side web services to exend JSDraw capabilities
  3. MolEngine - .NET Cheminformatics Toolkit
  4. MolEngine.Plugins - Third-party modules to extend MolEngine capabilities
  5. MolSql - Chemistry Cartridge for Microsoft SQL Server

This release includes:

  1. JSDraw 2.1.4
    1. bugfix: pasting structure is broken
  2. JSDraw.WebServices 2.1.4
    1. Upgraded MolEngine to 1.3.11
  3. MolEngine 1.3.11
    1. bugfix: "STI571" should not be read as SMILES
    2. Add 1200+ new drug names to MolEngine native synonym table
    3. bugfix: some mofile cannot be read in Swedish/German system
    4. be able to disable external name lookup
    5. add duplication check in MemorySearch
    6. Revamp MolProperty/CompProfile
    7. Be able to sort MemorySearch
    8. Improve Radar chart for Rules of 5
    9. MemorySearch to read/write CSV file, using smiles as structure
    10. Be able to store records in MolEngine db without structures
    11. Be able to draw flag on structures
    12. Be able to filter MemorySearch without structure query
    13. Stereochemistry info gets lost in TouchMol Editor
  4. MolEngine Plugins
    1. Update OpenEye Structure-to-Name plugin
  5. MolSql 1.3.11
    1. bugfix: Formula Search is broken

To download DevSuite or individual modules:

  1. JSDraw: http://www.scilligence.com/web/download.aspx?prod=JSDraw
  2. JSDraw.WebServices: http://www.scilligence.com/web/download.aspx?prod=JSDraw.WebServices
  3. MolEngine: http://www.scilligence.com/web/download.aspx?prod=MolEngine
  4. MolEngine.Plugins: http://www.scilligence.com/web/download.aspx?prod=MolEngine.Plugins
  5. MolSql: http://www.scilligence.com/web/download.aspx?prod=MolSql

Please contact us from our website http://www.scilligence.com/web/contact.aspx to schedule a demo, begin an evaluation, or request further information.

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TouchMol.Table Screenshots 

Saturday, November 17, 2012 10:07:00 PM
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