Cheminformatics DevSuite 4.0.0 Release, Including JSDraw, MolEngine and MolSql 

Monday, May 04, 2015 9:29:00 AM

Scilligence Cheminformatics Development Suite (DevSuite, http://devsuite.scilligence.com) is a complete toolkit for developers to build web applications and .NET applications.  DevSuite contains following modules:

  1. JSDraw.Draw - Javascript framework for Chemistry and Biology, inclucing JSDraw Editor, Sequence Editor, JSDraw.Form etc.
  2. JSDraw.NET - A .NET wrapper of JSDraw
  3. JSDraw.WebServices - JSDraw server side web services to exend JSDraw capabilities
  4. MolEngine - .NET Cheminformatics Toolkit
  5. MolEngine.Plugins - Third-party modules to extend MolEngine capabilities
  6. MolSql - Chemistry Cartridge for Microsoft SQL Server

DevSuite release 4.0.0 includes (demo):

  1. JSDraw 4.0.0
    1. Detect atom stereochemistry
    2. Improve workflow features
    3. Encrypt password in JSDraw.Form
    4. Improved PepTide builder
    5. Some bugfixes
  2. JSDraw.NET 4.0.0
    1. Upgraded MolEngine to version 4.0.0
  3. JSDraw.WebServices 4.0.0
    1. Upgraded MolEngine to version 4.0.0
  4. MolEngine 4.0.0
    1. Expose atom stereochemistry detection for JSDraw web services
    2. Support C# script in Workflow nodes
    3. Support condition control in Workflow
    4. Improved password management
    5. Improved LDAP authentication
    6. Some bugfixes
  5. MolEngine Plugins 4.0.0
    1. No changes for this release
  6. MolSql 4.0.0
    1. Upgraded MolEngine to version 4.0.0

To download DevSuite or individual modules:

  1. JSDraw: http://www.scilligence.com/web/download.aspx?prod=JSDraw
  2. JSDraw.WebServices: http://www.scilligence.com/web/download.aspx?prod=JSDraw.WebServices
  3. MolEngine: http://www.scilligence.com/web/download.aspx?prod=MolEngine
  4. MolEngine.Plugins: http://www.scilligence.com/web/download.aspx?prod=MolEngine.Plugins
  5. MolSql: http://www.scilligence.com/web/download.aspx?prod=MolSql

Please contact us here http://www.scilligence.com/web/contact.aspx to schedule a demo, begin an evaluation, or request further information.

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Scilligence ELN 4.0.0 Release 

Monday, May 04, 2015 8:11:00 AM

Scilligence ELN is a completely web-based electronic lab notebook system for Chemistry and Biology.

Scilligence ELN 4.0.0 includes following changes and improvements:

  1. Improved peptide science
  2. New analytical request and tracking feature
  3. Improved combi-chem enumeration
  4. Improved formulation experiment types
  5. Improved password protection mechanism
  6. Integrated with PMF workflow to manage business processes
  7. Be able to replicate experiments from one ELN database to another ELN database
  8. Individual users are able to set up My Reagents
  9. Automatically alert hazard reagents
  10. New HTS features, including designing HTS templates; putting data to instruments and pulling data out of instruments; automatically processing raw assay data; and automatically and manually performing data QC.
  11. Added ELN free form template feature
  12. Be able to change notebook name (not notebook ID)
  13. Added FileShelf features to integrate analytical data
  14. Single-sign-on with other Scilligence applications
  15. Some bug fixes

Please contact us from our website http://www.scilligence.com/web/contact.aspx to schedule a demo, begin an evaluation, or request further information.

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Recommend Zebra GX430t Barcode Printers with Ethernet Port 

Tuesday, April 07, 2015 12:14:00 PM

Some Zebra GX430t model has an ethernet port, which makes it very convenient to deploy.  With the ethernet port, the printer can be directly connected to company network.  RegMol, ELN and Inventory can directly print barcodes to the printer with setting up any server to host the printer.

Not all GX430t has ethernet port, so please make sure it comes with one when you purchase it.

GX430t is affordable.  On Amazon, the price is between $400-$700.

Some Technical Hints:

  1. To connect to Ethernet
    1. Press the top green button, and hold till the green light flashing, then release it
    2. Power off
    3. Power on again
    4. Press the top green button, and hold till the green light flashing, then release it.  It will print the printer's IP address
  2. Users can use ZebraDesigner software to design the labels visually, then print the label into file to get ZPL. You can copy the output ZPL by openning the printed file in Notepad.  With minor changes, the ZPL can be directly put in ELN/RegMol/Inventory configuration file.
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Informatics Workshop: Data Driven Discovery from Scilligence 

Friday, March 27, 2015 1:55:00 PM

Informatics Workshop: Data Driven Discovery from Scilligence

Scilligence would like to cordially invite you to indulge in the annual workshop series. The event will focus on the current state of the art informatics solutions for life sciences from Scilligence. A series of short presentations from our peers at  pharmaceutical & biotech companies and CROs will cover a wide array of solutions to inspire and facilitate data driven discovery. The pleasure of your company will be highly appreciated.

  • Event Date/Time:  Tuesday April 21st, 2015 (10:00am to 2:30pm)
  • Event Location: MassBio Conference Room, 300 Technology Square, 8th Floor, Cambridge, MA 02139
  • Event Title: Data Driven Discovery Facilitated by Scilligence Informatics

Event Description:

With prevalence of cross-organization collaborations, R&D reorganizations and biotech company virtualization, it has become challenging to make research data available and sharable to relevant parties in a timely and secure manner.  In this workshop, we will discuss Scilligence’s informatics platforms (Scilligence ELN, RegMol, Inventory, PMF, Chrawler, TouchMol4Office and SAR Analyzer) to facilitate data driven discovery in biotech and pharma.

For more information please visit: www.scilligence.com

Agenda:

  • 10:00-10:30         Registration & Coffee
  • 10:30-11:00         Overview of Scilligence Informatics
  • 11:00-12:00         Scilligence Informatics, Part I
  • 12:00-1:00           Lunch (Provided by Scilligence)
  • 1:00-2:15              Scilligence Informatics, Part II

Registration:     https://www.eventbrite.co.uk/e/workshop-on-scilligence-informatics-tickets-16355655205

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Scilligence Inventory 3.2.2 Release 

Wednesday, February 04, 2015 8:50:00 AM

Scilligence Inventory is a web-based sample management and tracking for Chemical, Biological, and other research entities.

Scilligence Inventory 3.2.2  inlcudes following features:

  1. Added Statistics module to generate reagents/chemicals usage, stock reports
  2. Added flags to indicate hazard reagents
  3. Supports multiple files, images, tables, richtexts in data fields
  4. Be able to add pictures in custom data form
  5. Dynamically linked to Reagent Database
  6. Some other bugfixes

Please contact us from our website http://www.scilligence.com/web/contact.aspx to schedule a demo, begin an evaluation, or request further information.

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RegMol 3.2.2 Release 

Wednesday, February 04, 2015 8:47:00 AM

RegMol is a molecule registration and assay database system, enabling scientists to register and track small-molecules, biologics and biological conjugates, storing and retreiving biological assay data.

RegMol 3.2.2 includes following improvements and changes:

  1. Be able to preview attached chemical files
  2. Added date field to molecule sheet
  3. Be able to attach files to projects
  4. Supporting operators in assay results
  5. Added two new assay column types,Table and Richtext, to capture raw assay data.
  6. Some other bugfixes

Please contact us from our website http://www.scilligence.com/web/contact.aspx to schedule a demo, begin an evaluation, or request further information.

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Scilligence ELN 3.2.2 Release 

Wednesday, February 04, 2015 8:45:00 AM

Scilligence ELN is a completely web-based electronic lab notebook system for Chemistry and Biology.

Scilligence ELN 3.2.2 includes following changes and improvements:

  1. Be able to give notebook names
  2. Added One-Phase Formulation type
  3. Be able to use weight-by-weight concentration
  4. FileShelf to dynamically load associated files, such as analytical files
  5. Be able to do Curve Fitting inside ELN
  6. Enable SSO with SAML
  7. Some other bugfixes

Please contact us from our website http://www.scilligence.com/web/contact.aspx to schedule a demo, begin an evaluation, or request further information.

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Cheminforatics DevSuite 3.2.3 Release, Including JSDraw, MolEngine and MolSql 

Tuesday, February 03, 2015 9:39:00 AM

Scilligence Cheminformatics Development Suite (DevSuite, http://devsuite.scilligence.com) is a complete toolkit for developers to build web applications and .NET applications.  DevSuite contains following modules:

  1. JSDraw.Draw - Javascript framework for Chemistry and Biology, inclucing JSDraw Editor, Sequence Editor, JSDraw.Form etc.
  2. JSDraw.NET - A .NET wrapper of JSDraw
  3. JSDraw.WebServices - JSDraw server side web services to exend JSDraw capabilities
  4. MolEngine - .NET Cheminformatics Toolkit
  5. MolEngine.Plugins - Third-party modules to extend MolEngine capabilities
  6. MolSql - Chemistry Cartridge for Microsoft SQL Server

DevSuite release 3.2.3 includes (demo):

  1. JSDraw 3.2.3
    1. Introduced Workflow Designer and Workflow Engine
    2. Improved partial flipping3
    3. bugfix: modifying peptide sequence letter doesn't change the superatom structure
    4. Be able to expand all peptide nodes
    5. Introduce Peptide Builder
    6. File/Image/Richtext/Tabtext fields support multiple items
    7. Improved Assay Curve
    8. Added FieldSketches class
  2. JSDraw.NET 3.2.3
    1. Upgraded MolEngine to version 3.2.3
  3. JSDraw.WebServices 3.2.3
    1. Upgraded MolEngine to version 3.2.3
  4. MolEngine 3.2.3
    1. Support JSDraw workflow
    2. Introduced Workflow Engine designed in JSDraw
    3. Improved salt stripping
    4. *jsdraw.abbreviations* setting can be a url
  5. MolEngine Plugins 3.2.3
    1. No changes for this release
  6. MolSql 3.2.3
    1. bugfix: long sequence crashes MolSql.
    2. Added two new funciton Bin2Str and Str2Bin

To download DevSuite or individual modules:

  1. JSDraw: http://www.scilligence.com/web/download.aspx?prod=JSDraw
  2. JSDraw.WebServices: http://www.scilligence.com/web/download.aspx?prod=JSDraw.WebServices
  3. MolEngine: http://www.scilligence.com/web/download.aspx?prod=MolEngine
  4. MolEngine.Plugins: http://www.scilligence.com/web/download.aspx?prod=MolEngine.Plugins
  5. MolSql: http://www.scilligence.com/web/download.aspx?prod=MolSql

Please contact us here http://www.scilligence.com/web/contact.aspx to schedule a demo, begin an evaluation, or request further information.

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Scilligence Builds A Generic Workflow Engine to Drive Scientific Data 

Friday, January 23, 2015 12:31:00 PM

Scilligence builds a generic workflow engine to drive scientific data:

  1. Customers are able to design the workflow by using Workflow Design built in JSDraw
  2. The workflow engine built in MolEngine to drive data flow through Scilligence ELN, RegMol, Scilligence Inventory and PMF.
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Cheminforatics DevSuite 3.2.2 Release, Including JSDraw, MolEngine and MolSql 

Tuesday, January 06, 2015 2:57:00 PM

Scilligence Cheminformatics Development Suite (DevSuite, http://devsuite.scilligence.com) is a complete toolkit for developers to build web applications and .NET applications.  DevSuite contains following modules:

  1. JSDraw.Draw - Javascript framework for Chemistry and Biology, inclucing JSDraw Editor, Sequence Editor, JSDraw.Form etc.
  2. JSDraw.NET - A .NET wrapper of JSDraw
  3. JSDraw.WebServices - JSDraw server side web services to exend JSDraw capabilities
  4. MolEngine - .NET Cheminformatics Toolkit
  5. MolEngine.Plugins - Third-party modules to extend MolEngine capabilities
  6. MolSql - Chemistry Cartridge for Microsoft SQL Server

DevSuite release 3.2.2 includes (demo):

  1. JSDraw 3.2.2
    1. Improved Assay Plate
    2. CurveFitting to show standard errors
    3. Be able to custom Atom List
    4. bugfix: Problem on setting Polymer MW
    5. Be able to mark molecule chirality
    6. Be able to set column formula
    7. Be able to set Table rounding method and decimal
  2. JSDraw.NET 3.2.2
    1. Upgraded MolEngine to version 3.2.2
  3. JSDraw.WebServices 3.2.2
    1. Upgraded MolEngine to version 3.2.2
  4. MolEngine 3.2.2
    1. Support assay curve new features
    2. A few bugfixes.
  5. MolEngine Plugins 3.2.2
    1. No changes for this release
  6. MolSql 3.2.2
    1. No changes for this release

To download DevSuite or individual modules:

  1. JSDraw: http://www.scilligence.com/web/download.aspx?prod=JSDraw
  2. JSDraw.WebServices: http://www.scilligence.com/web/download.aspx?prod=JSDraw.WebServices
  3. MolEngine: http://www.scilligence.com/web/download.aspx?prod=MolEngine
  4. MolEngine.Plugins: http://www.scilligence.com/web/download.aspx?prod=MolEngine.Plugins
  5. MolSql: http://www.scilligence.com/web/download.aspx?prod=MolSql

Please contact us here http://www.scilligence.com/web/contact.aspx to schedule a demo, begin an evaluation, or request further information.

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TouchMol for Office 2.3.0 Release, Including MedChem Suite 

Friday, November 07, 2014 3:08:00 PM

TouchMol for Office is delivered as a set of add-ins to the Microsoft Office application programs, enabling the input and editing of molecular structures within Word, Excel, PowerPoint, and OneNote.

TouchMol 2.3.0 includes the following new features:

  1. New Visualization module to draw scatter plots
  2. Dose-reponse curve fitting feature with TouchMol application, TouchMol for Excel, TouchMol for Word and Touchmol for PowerPoint
  3. Be able to draw IC50 curves
  4. Improve SAR analyzing speed
  5. Improved polymer support
  6. Improved eraser feature
  7. other bugfixes

To download our TouchMol, follow the links below:

TouchMol for Office 2010 and 2013 (for both x86 and x64):
http://www.scilligence.com/web/download.aspx?prod=TouchMol4Office201x

TouchMol for Office 2007:
http://www.scilligence.com/web/download.aspx?prod=TouchMol4Office2007

TouchMol Desktop:
http://www.scilligence.com/web/download.aspx?prod=TouchMolDesktop

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Scilligence Inventory 3.2.0 Release 

Wednesday, November 05, 2014 8:08:00 AM

Scilligence Inventory is a web-based sample management and tracking for Chemical, Biological, and other research entities.

Scilligence Inventory 3.2.0  inlcudes following features:

  1. Improved Shipping workflow
  2. bugfix: be able to delete disposed containers
  3. Upgraded dojo to version 1.10.2 to makie it work on iOS 8.x

Please contact us from our website http://www.scilligence.com/web/contact.aspx to schedule a demo, begin an evaluation, or request further information.

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RegMol 3.2.0 Release 

Wednesday, November 05, 2014 8:04:00 AM

RegMol is a molecule registration and assay database system, enabling scientists to register and track small-molecules, biologics and biological conjugates, storing and retreiving biological assay data.

RegMol 3.2.0 includes following improvements and changes:

  1. Be able to do Curve Fitting inside RegMol
  2. View curves in protocol assay result list, project portal, and assay view
  3. Be able to batch register No-Structure
  4. Be able to kekulize structures before registering them
  5. Support sequence auto-annotation
  6. Automatic sequence annotating
  7. Be able to register Polymer, and molecule doesn't have specific structures
  8. Upgraded dojo to version 1.10.2 to makie it work on iOS 8.x

Please contact us from our website http://www.scilligence.com/web/contact.aspx to schedule a demo, begin an evaluation, or request further information.

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Scilligence ELN 3.2.0 Release 

Wednesday, November 05, 2014 7:57:00 AM

Scilligence ELN is a completely web-based electronic lab notebook system for Chemistry and Biology.

Scilligence ELN 3.2.0 includes following changes and improvements:

  1. Added FileShelf function to dynamically load associated files, such as analytical files.
  2. Perform Curve Fitting inside ELN, including 4P, 3P, and 2P fitting
  3. Added biology Free Form
  4. Improved Project Compounds, and show summary of all of them
  5. Double click to select a fragment
  6. Upgraded dojo to version 1.10.2 to makie it work on iOS 8.x

Please contact us from our website http://www.scilligence.com/web/contact.aspx to schedule a demo, begin an evaluation, or request further information.

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Curve Fitting function are available in multiple products 

Tuesday, November 04, 2014 8:35:00 PM

Dose-response curve fitting function are available in following products:

  1. Scilligence ELN
  2. RegMol
  3. Chem4SharePoint
  4. TouchMol for Office, including TouchMol for Excel, TouchMol for Word, TouchMol for PowerPoint, TouchMol Desktop App, and TouchMol365
  5. JSDraw through JSDraw.WebServices

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Cheminforatics DevSuite 3.2.1 Release, Including JSDraw, MolEngine and MolSql 

Friday, October 31, 2014 7:48:00 AM

Scilligence Cheminformatics Development Suite (DevSuite, http://devsuite.scilligence.com) is a complete toolkit for developers to build web applications and .NET applications.  DevSuite contains following modules:

  1. JSDraw.Draw - Javascript framework for Chemistry and Biology, inclucing JSDraw Editor, Sequence Editor, JSDraw.Form etc.
  2. JSDraw.NET - A .NET wrapper of JSDraw
  3. JSDraw.WebServices - JSDraw server side web services to exend JSDraw capabilities
  4. MolEngine - .NET Cheminformatics Toolkit
  5. MolEngine.Plugins - Third-party modules to extend MolEngine capabilities
  6. MolSql - Chemistry Cartridge for Microsoft SQL Server

DevSuite release 3.2.1 includes (demo):

  1. JSDraw 3.2.1
    1. Be able to show overlapped sequence annotations
    2. Automatically biological sequence annotating
    3. Add ColorPicker field type: color
    4. Draw Assay Curves
    5. Curve Fitting with JSDraw.WebServices
    6. Double click to select fragments
    7. Upgraded dojo to version 1.10.2 to makie it work on iOS 8.x
  2. JSDraw.NET 3.2.1
    1. Upgraded MolEngine to version 3.2.1
  3. JSDraw.WebServices 3.2.1
    1. Upgraded MolEngine to version 3.2.1
  4. MolEngine 3.2.1
    1. Add Curve Fitting for biological data
    1. Support Assay Curve
    1. bugfix: MolDrawing.BondWith not working
    2. Be able to load web.config from database
    3. Create MemorySearch *SharedMode*.  It is thread safe in Shared mode.
  5. MolEngine Plugins 3.2.1
    1. No changes for this release
  6. MolSql 3.2.1
    1. No changes for this release

To download DevSuite or individual modules:

  1. JSDraw: http://www.scilligence.com/web/download.aspx?prod=JSDraw
  2. JSDraw.WebServices: http://www.scilligence.com/web/download.aspx?prod=JSDraw.WebServices
  3. MolEngine: http://www.scilligence.com/web/download.aspx?prod=MolEngine
  4. MolEngine.Plugins: http://www.scilligence.com/web/download.aspx?prod=MolEngine.Plugins
  5. MolSql: http://www.scilligence.com/web/download.aspx?prod=MolSql

Please contact us here http://www.scilligence.com/web/contact.aspx to schedule a demo, begin an evaluation, or request further information.

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Chrawler 3.0.1 Release 

Monday, October 27, 2014 8:06:00 AM

Chrawler™ is a federated chemical structure search solution for enterprises, which enables users to do one-stop search cross all data sources, including files on network drives, SharePoint database, Emails, ELN, and other databases (Oracle, SQL Server etc.)

Chrawler™ SE 3.0.1 release includes following improvements and changes:

  1. Improved crawling performance
  2. Support proxy when downloading contents
  3. Improved polymer support
  4. Support iOS 8.x by upgrading dojo to 1.10.2
  5. A few bug fixes

Please contact us from our website http://www.scilligence.com/web/contact.aspx to schedule a demo, begin an evaluation, or request further information.

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Chem4SharePoint 3.0.1 Release 

Monday, October 27, 2014 8:01:00 AM

Chem4SharePoint™ enables chemistry capabilities within SharePoint.  With Chem4SharePoint, scientists are able to draw, display, and search chemical structures in SharePoint.  Chem4SharePoint also provides an out-of-the-box solution for a one-stop-shopping chemical structure search capability for enterprises.

Chem4SharePoint 3.0.1 release includes following improvements and changes:

  1. Draw assay curves, and perform curve fitting
  2. Improved installation by using PowerShell scripts
  3. Moved all components to site level
  4. Completely support hive-15 on SharePoint 2013
  5. Support iOS 8.x by upgrading dojo to 1.10.2
  6. Bugfix: cannot crawl Discussion main message
  7. Bugfix: ChemDraw doesn't save structures

Please contact us from our website http://www.scilligence.com/web/contact.aspx to schedule a demo, begin an evaluation, or request further information.

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New Feature Preview - IC50 Curve and Curve Fitting 

Friday, October 03, 2014 8:25:00 AM

It is able to draw IC50 Curves with JSDraw: (Try it)

Scillgence ELN can do IC50 curve fitting:

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Scilligence Inventory 3.1.0 Release 

Friday, September 19, 2014 1:39:00 PM

Scilligence Inventory is a web-based sample management and tracking for Chemical, Biological, and other research entities.

Scilligence Inventory 3.1.0 includes following features:

  1. Support polymers
  2. Be able to create shipments
  3. Be able to insert images and files in product forms

Please contact us from our website http://www.scilligence.com/web/contact.aspx to schedule a demo, begin an evaluation, or request further information.

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